OpenFold3 structure prediction model now deployable on Amazon SageMaker JumpStart
AWS has added OpenFold3-preview to Amazon SageMaker JumpStart, so teams can deploy the open-source structure prediction model into their own AWS account. OpenFold3 comes from the OpenFold Consortium and the AlQuraishi Lab at Columbia University and is released under Apache 2.0; version 0.4.1 predicts joint 3D structures of proteins, DNA, RNA, small-molecule ligands and their complexes as a single all-atom model. On JumpStart it runs on asynchronous inference endpoints on ml.g6 instances, with invocation timeouts up to one hour, request queuing, optional autoscaling and scale-to-zero. Outputs are mmCIF files with pLDDT, PAE and PDE confidence metrics; the developers call it a research preview.
Sources
- PrimaryAWS Machine Learning
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